]> git.sesse.net Git - plocate/blob - plocate-build.cpp
Optimize pending_docids storage for smaller posting lists.
[plocate] / plocate-build.cpp
1 #include <assert.h>
2 #include <stdio.h>
3 #include <string.h>
4 #include <algorithm>
5 #include <unordered_map>
6 #include <string>
7 #include <vector>
8 #include <chrono>
9 #include <unistd.h>
10 #include <fcntl.h>
11 #include <sys/mman.h>
12 #include <arpa/inet.h>
13 #include <endian.h>
14 #include <sys/types.h>
15 #include <sys/stat.h>
16 #include <zstd.h>
17
18 #define VINT_IN
19 #include "vint.h"
20 #include "vp4.h"
21
22 #define P4NENC_BOUND(n) ((n+127)/128+(n+32)*sizeof(uint32_t))
23 #define dprintf(...)
24 //#define dprintf(...) fprintf(stderr, __VA_ARGS__);
25
26 using namespace std;
27 using namespace std::chrono;
28
29 string zstd_compress(const string &src, string *tempbuf);
30         
31 static inline uint32_t read_unigram(const string_view s, size_t idx)
32 {
33         if (idx < s.size()) {
34                 return (unsigned char)s[idx];
35         } else {
36                 return 0;
37         }
38 }
39
40 static inline uint32_t read_trigram(const string_view s, size_t start)
41 {
42         return read_unigram(s, start) |
43                 (read_unigram(s, start + 1) << 8) |
44                 (read_unigram(s, start + 2) << 16);
45 }
46
47 enum
48 {
49         DBE_NORMAL          = 0,    /* A non-directory file */
50         DBE_DIRECTORY       = 1,    /* A directory */
51         DBE_END             = 2   /* End of directory contents; contains no name */
52 };
53
54 // From mlocate.
55 struct db_header
56 {
57         uint8_t magic[8];
58         uint32_t conf_size;
59         uint8_t version;
60         uint8_t check_visibility;
61         uint8_t pad[2];
62 };
63
64 // From mlocate.
65 struct db_directory
66 {
67         uint64_t time_sec;
68         uint32_t time_nsec;
69         uint8_t pad[4];
70 };
71
72 class PostingListBuilder {
73 public:
74         void add_docid(uint32_t docid);
75         void finish();
76
77         string encoded;
78         size_t num_docids = 0;
79
80 private:
81         void write_header(uint32_t docid);
82         void append_block();
83
84         vector<uint32_t> pending_docids;
85
86         uint32_t last_block_end;
87 };
88
89 void PostingListBuilder::add_docid(uint32_t docid)
90 {
91         // Deduplicate against the last inserted value, if any.
92         if (pending_docids.empty()) {
93                 if (encoded.empty()) {
94                         // Very first docid.
95                         write_header(docid);
96                         ++num_docids;
97                         last_block_end = docid;
98                         return;
99                 } else if (docid == last_block_end) {
100                         return;
101                 }
102         } else {
103                 if (docid == pending_docids.back()) {
104                         return;
105                 }
106         }
107
108         pending_docids.push_back(docid);
109         if (pending_docids.size() == 128) {
110                 append_block();
111                 pending_docids.clear();
112                 last_block_end = docid;
113         }
114         ++num_docids;
115 }
116
117 void PostingListBuilder::finish()
118 {
119         if (pending_docids.empty()) {
120                 return;
121         }
122
123         assert(!encoded.empty());  // write_header() should already have run.
124
125         // No interleaving for partial blocks.
126         unsigned char buf[P4NENC_BOUND(128)];
127         unsigned char *end = p4d1enc32(pending_docids.data(), pending_docids.size(), buf, last_block_end);
128         encoded.append(reinterpret_cast<char *>(buf), reinterpret_cast<char *>(end));
129 }
130
131 void PostingListBuilder::append_block()
132 {
133         unsigned char buf[P4NENC_BOUND(128)];
134         assert(pending_docids.size() == 128);
135         unsigned char *end = p4d1enc128v32(pending_docids.data(), 128, buf, last_block_end);
136         encoded.append(reinterpret_cast<char *>(buf), reinterpret_cast<char *>(end));
137 }
138
139 void PostingListBuilder::write_header(uint32_t docid)
140 {
141         unsigned char buf[P4NENC_BOUND(1)];
142         size_t bytes = p4nd1enc128v32(&docid, 1, buf);
143         encoded.append(reinterpret_cast<char *>(buf), bytes);
144 }
145
146 class Corpus {
147 public:
148         Corpus(size_t block_size) : block_size(block_size) {}
149         void add_file(string filename);
150         void flush_block();
151
152         vector<string> filename_blocks;
153         unordered_map<uint32_t, PostingListBuilder> invindex;
154         size_t num_files = 0, num_files_in_block = 0, num_blocks = 0;
155
156 private:
157         string current_block;
158         string tempbuf;
159         const size_t block_size;
160 };
161
162 void Corpus::add_file(string filename)
163 {
164         ++num_files;
165         if (!current_block.empty()) {
166                 current_block.push_back('\0');
167         }
168         current_block += filename;
169         if (++num_files_in_block == block_size) {
170                 flush_block();
171         }
172 }
173
174 void Corpus::flush_block()
175 {
176         if (current_block.empty()) {
177                 return;
178         }
179
180         uint32_t docid = num_blocks;
181
182         // Create trigrams.
183         const char *ptr = current_block.c_str();
184         while (ptr < current_block.c_str() + current_block.size()) {
185                 string_view s(ptr);
186                 if (s.size() >= 3) {
187                         for (size_t j = 0; j < s.size() - 2; ++j) {
188                                 uint32_t trgm = read_trigram(s, j);
189                                 invindex[trgm].add_docid(docid);
190                         }
191                 }
192                 ptr += s.size() + 1;
193         }
194
195         // Compress and add the filename block.
196         filename_blocks.push_back(zstd_compress(current_block, &tempbuf));
197
198         current_block.clear();
199         num_files_in_block = 0;
200         ++num_blocks;
201 }
202
203 const char *handle_directory(const char *ptr, Corpus *corpus)
204 {
205         ptr += sizeof(db_directory);
206
207         string dir_path = ptr;
208         ptr += dir_path.size() + 1;
209         if (dir_path == "/") {
210                 dir_path = "";
211         }
212                 
213         for ( ;; ) {
214                 uint8_t type = *ptr++;
215                 if (type == DBE_NORMAL) {
216                         string filename = ptr;
217                         corpus->add_file(dir_path + "/" + filename);
218                         ptr += filename.size() + 1;
219                 } else if (type == DBE_DIRECTORY) {
220                         string dirname = ptr;
221                         corpus->add_file(dir_path + "/" + dirname);
222                         ptr += dirname.size() + 1;
223                 } else {
224                         return ptr;
225                 }
226         }
227 }
228
229 void read_mlocate(const char *filename, Corpus *corpus)
230 {
231         int fd = open(filename, O_RDONLY);
232         if (fd == -1) {
233                 perror(filename);
234                 exit(1);
235         }
236         off_t len = lseek(fd, 0, SEEK_END);
237         if (len == -1) {
238                 perror("lseek");
239                 exit(1);
240         }
241         const char *data = (char *)mmap(nullptr, len, PROT_READ, MAP_SHARED, fd, /*offset=*/0);
242         if (data == MAP_FAILED) {
243                 perror("mmap");
244                 exit(1);
245         }
246
247         const db_header *hdr = (const db_header *)data;
248
249         // TODO: Care about the base path.
250         string path = data + sizeof(db_header);
251         uint64_t offset = sizeof(db_header) + path.size() + 1 + ntohl(hdr->conf_size);
252
253         const char *ptr = data + offset;
254         while (ptr < data + len) {
255                 ptr = handle_directory(ptr, corpus);
256         }
257
258         munmap((void *)data, len);
259         close(fd);
260 }
261
262 string zstd_compress(const string &src, string *tempbuf)
263 {
264         size_t max_size = ZSTD_compressBound(src.size());
265         if (tempbuf->size() < max_size) {
266                 tempbuf->resize(max_size);
267         }
268         size_t size = ZSTD_compress(&(*tempbuf)[0], max_size, src.data(), src.size(), /*level=*/6);
269         return string(tempbuf->data(), size);
270 }
271
272 void do_build(const char *infile, const char *outfile, int block_size)
273 {
274         //steady_clock::time_point start = steady_clock::now();
275
276         Corpus corpus(block_size);
277
278         read_mlocate(infile, &corpus);
279         if (false) {  // To read a plain text file.
280                 FILE *fp = fopen(infile, "r");
281                 while (!feof(fp)) {
282                         char buf[1024];
283                         if (fgets(buf, 1024, fp) == nullptr || feof(fp)) {
284                                 break;
285                         }
286                         string s(buf);
287                         if (s.back() == '\n') s.pop_back();
288                         corpus.add_file(move(s));
289                 }
290                 fclose(fp);
291         }
292         corpus.flush_block();
293         dprintf("Read %zu files from %s\n", corpus.num_files, infile);
294
295         size_t trigrams = 0, longest_posting_list = 0;
296         size_t bytes_used = 0;
297         for (auto &[trigram, pl_builder] : corpus.invindex) {
298                 pl_builder.finish();
299                 longest_posting_list = max(longest_posting_list, pl_builder.num_docids);
300                 trigrams += pl_builder.num_docids;
301                 bytes_used += pl_builder.encoded.size();
302         }
303         dprintf("%zu files, %zu different trigrams, %zu entries, avg len %.2f, longest %zu\n",
304                 corpus.num_files, corpus.invindex.size(), trigrams, double(trigrams) / corpus.invindex.size(), longest_posting_list);
305         dprintf("%zu bytes used for posting lists (%.2f bits/entry)\n", bytes_used, 8 * bytes_used / double(trigrams));
306
307         //steady_clock::time_point end = steady_clock::now();
308         dprintf("Building posting lists took %.1f ms.\n\n", 1e3 * duration<float>(end - start).count());
309
310         vector<uint32_t> all_trigrams;
311         for (auto &[trigram, pl_builder] : corpus.invindex) {
312                 all_trigrams.push_back(trigram);
313         }
314         sort(all_trigrams.begin(), all_trigrams.end());
315
316         umask(0027);
317         FILE *outfp = fopen(outfile, "wb");
318
319         // Write the header.
320         uint64_t num_trigrams = corpus.invindex.size();  // 64 to get alignment.
321         fwrite(&num_trigrams, sizeof(num_trigrams), 1, outfp);
322
323         // Find out where the posting lists will end.
324         uint64_t offset = sizeof(uint64_t) * 2 + 16 * all_trigrams.size();
325         uint64_t filename_index_offset = offset;
326         for (auto &[trigram, pl_builder] : corpus.invindex) {
327                 filename_index_offset += pl_builder.encoded.size();
328         }
329         fwrite(&filename_index_offset, sizeof(filename_index_offset), 1, outfp);
330
331         size_t bytes_for_trigrams = 0, bytes_for_posting_lists = 0, bytes_for_filename_index = 0, bytes_for_filenames = 0;
332         for (uint32_t trgm : all_trigrams) {
333                 // 16 bytes: trgm (4), number of docids (4), byte offset (8)
334                 fwrite(&trgm, sizeof(trgm), 1, outfp);  // One byte wasted, but OK.
335                 const PostingListBuilder &pl_builder = corpus.invindex[trgm];
336                 uint32_t num_docids = pl_builder.num_docids;
337                 fwrite(&num_docids, sizeof(num_docids), 1, outfp);
338                 fwrite(&offset, sizeof(offset), 1, outfp);
339                 offset += pl_builder.encoded.size();
340                 bytes_for_trigrams += 16;
341         }
342
343         // Write the actual posting lists.
344         for (uint32_t trgm : all_trigrams) {
345                 const string &encoded = corpus.invindex[trgm].encoded;
346                 fwrite(encoded.data(), encoded.size(), 1, outfp);
347                 bytes_for_posting_lists += encoded.size();
348         }
349
350         // Stick an empty block at the end as sentinel.
351         corpus.filename_blocks.push_back("");
352
353         // Write the offsets to the filenames.
354         offset = filename_index_offset + corpus.filename_blocks.size() * sizeof(offset);
355         for (const string &filename : corpus.filename_blocks) {
356                 fwrite(&offset, sizeof(offset), 1, outfp);
357                 offset += filename.size();
358                 bytes_for_filename_index += sizeof(offset);
359                 bytes_for_filenames += filename.size();
360         }
361         
362         // Write the actual filenames.
363         for (const string &filename : corpus.filename_blocks) {
364                 fwrite(filename.data(), filename.size(), 1, outfp);
365         }
366
367         fclose(outfp);
368
369         //size_t total_bytes = (bytes_for_trigrams + bytes_for_posting_lists + bytes_for_filename_index + bytes_for_filenames);
370
371         dprintf("Block size:     %7d files\n", block_size);
372         dprintf("Trigrams:       %'7.1f MB\n", bytes_for_trigrams / 1048576.0);
373         dprintf("Posting lists:  %'7.1f MB\n", bytes_for_posting_lists / 1048576.0);
374         dprintf("Filename index: %'7.1f MB\n", bytes_for_filename_index / 1048576.0);
375         dprintf("Filenames:      %'7.1f MB\n", bytes_for_filenames / 1048576.0);
376         dprintf("Total:          %'7.1f MB\n", total_bytes / 1048576.0);
377         dprintf("\n");
378 }
379
380 int main(int argc, char **argv)
381 {
382         do_build(argv[1], argv[2], 32);
383         exit(EXIT_SUCCESS);
384 }